Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015914438.1_cds_XP_016464422.1_57461
CDS Infomation

[gene=LOC107787380] [db_xref=GeneID:107787380] [protein=probable ADP-ribosylation factor GTPase-activating protein AGD5] [protein_id=XP_016464422.1] [location=complement(join(45763..45922,46702..46760,46845..46976,47666..47820,48236..48416,48510..48590,48994..49144,49276..49366,49455..49509,49926..50016,50310..50368,52716..52766))] [gbkey=CDS]
Sequence

ATGAATGAAAAAGCAAGAGTTTCAAAGGAGCTTAATGCTAAACATATGAAGATACTTGAG
GGACTACTTAAATTGCCAGAGAATCGAGAATGTGCCGACTGCAAAAGCAGAGGTCCAAGA
TGGGCTAGTGTGAACCTGGGAATCTTCATATGCTTACACTGTTCTGGTGTTCACAGGAGT
CTTGGAGTACATATATCAAAGGTACGATCTGCTACATTGGACACCTGGCTTCCCGAGCAG
GTTGCATTTATACAAACAATGGGAAATCAGAAATCAAATAGCTATTGGGAAGCCGAGCTG
CCTCCCAAATCCGGCAGAGTTGGTATTGAAAATTTTATCAGATCAAAATATGTGGAGAAA
AGATGGATACCACGAAAGGGGAATGTGAAAGCATCTCCTCGTGTCAGAGGAGAACATAAT
TCGGCTAGTAAACAGGGGACTGACGGGGATACAGTGTATATCAAGCGGAATATTGCACCT
CCTGAATTACCTAAGCAGATTGCCGCTGATCCTAAGCCAAAAGTTGTTCAGAATGCAAAA
CCAGTAGCCGCTGTGGAAGAAGCAAAGCAAAAGGCTAATGTTTCTTCTGATTCCCAGCAA
AAGGTTCTTCAGAATGTAGTACCGTCAATCTCTCAAGTCGCAAAAGCAAAGCCTGAAGCG
AATTTCTCCCCAACTGTATCAACAGCTAGCAACAACTATGCTGCTGACCCAAATGGAAAT
GGATCTGTTCTAAAGACACATTCGATAGGAGTGCCCCAACCGGGGGACGCAAAAACAGTA
ATCGAGCAGAATGCCCGTTCTACTGTTATAGAAAACAAGAACAAATTTGATGCAGGAATT
GAGGAACTGATAAAAGATTTTCAATGGAATACCCAGCCTGTCTTAGAAAACCCCTTGCAA
AATGTGAAGAATGAGCAACAAAAGTCGCTGAATCCACAGCAGCCTCCTCTGGTGCCTACT
ACAGTAAAGCATTTTAGTTGTCCTCAAACCATGTATCAAGCTTCAAATGGAAACCAGCAA
TTTTATCAGGTCCATGGAAATAAGCAGATGGGAAGCGCTCAACATTTACACGCATCTACG
CCATCAGCCTATGCTCTAAACCCCAGCATGTTTTCTGCAATGCCAGTAGCTCCAATGAAT
GGAATAACAGCAACAGGAGCTATTAGGCCTTTGCCAAGTTTGCCAGCAGTTTCAGTTGTT
CCAATGCAATCAGGATACCATTATGATTTCTCATCGTTAACGCCTGAAATGTTATCAAGA
CGATAA

Peptide Sequence

PEP ID

XP_016464422.1
PEP Infomation

PREDICTED: probable ADP-ribosylation factor GTPase-activating protein AGD5 [Nicotiana tabacum]
Sequence

MNEKARVSKELNAKHMKILEGLLKLPENRECADCKSRGPRWASVNLGIFICLHCSGVHRS
LGVHISKVRSATLDTWLPEQVAFIQTMGNQKSNSYWEAELPPKSGRVGIENFIRSKYVEK
RWIPRKGNVKASPRVRGEHNSASKQGTDGDTVYIKRNIAPPELPKQIAADPKPKVVQNAK
PVAAVEEAKQKANVSSDSQQKVLQNVVPSISQVAKAKPEANFSPTVSTASNNYAADPNGN
GSVLKTHSIGVPQPGDAKTVIEQNARSTVIENKNKFDAGIEELIKDFQWNTQPVLENPLQ
NVKNEQQKSLNPQQPPLVPTTVKHFSCPQTMYQASNGNQQFYQVHGNKQMGSAQHLHAST
PSAYALNPSMFSAMPVAPMNGITATGAIRPLPSLPAVSVVPMQSGYHYDFSSLTPEMLSR
R

Transcript Sequence

Gene sequence data has not been registered.